Posts

This is an opinionated post on my belief how the future of text editing should be. I have been editing my CV recently. The purpose of a …
Last updated on 2 min read Thoughts, Data Science

I am writing this post not as a guideline, but mainly for self-reference and hopefully a prompt for discussion. The boom of …
Last updated on 3 min read Bioinformatics, Data Science

This compiles my notes for conda and snakemake. conda command update conda environment from yaml source activate myenv conda env update …
Last updated on 1 min read

Last updated on 1 min read Linux, Data Science

I have created this package to create a blank Rmd file by saving a nearly blank Rmd template to the menu when you create Rmd files. I …
Last updated on 1 min read Data Science

Here is a collection of commands relevant to using a remote server that I find helpful. Establish connection ssh -X -p *port* …
Last updated on 4 min read Linux

Here are some of the life savers that are not commonly introduced in standard bioinformatics curriculum. I think these toolkits …
Last updated on 2 min read Bioinformatics

This is a collection of common git commands that I use very often in my daily work. I have only touched on GitHub and find it fairly …
Last updated on 5 min read Data Science

System Choice I chose Ubuntu 18.04 LTS. Not any earlier version because to my knowledge most, if not all software for bioinformatics …
Last updated on 5 min read Linux

This post will cover how to start running a programme in a terminal’s background monitor the programme and stop the programme I …
Last updated on 2 min read Linux